T4 RNA Ligase 1 - HYJ236
T4 RNA Ligase 1 Cat. No. HYJ236

Product Overview

T4 RNA Ligase 1 is an ATP-dependent enzyme that catalyzes the formation of a phosphodiester bond between a 5′-phosphate terminus and a 3′-hydroxyl terminus. Its substrates are single-stranded RNA, single-stranded DNA, or mononucleotides, and the reaction can take place intermolecularly (joining two separate molecules) or intramolecularly (joining the two ends of one molecule). Because it acts on single-stranded ends, it is a basic tool for building and modifying RNA and short DNA molecules.

The enzyme is produced by expressing the T4 phage gene in E. coli. It is used in a range of applications:

  • Intermolecular joining of ssRNA
  • Joining of ssRNA to ssDNA
  • Labeling the 3′-OH ends of ssRNA with the radioisotope 5′-[³²P]pCp
  • Synthesis of single-stranded oligo RNAs and oligo DNAs
  • Specialized modification of tRNAs
  • Introduction of non-natural amino acids into proteins

This breadth makes T4 RNA Ligase 1 a useful component in RNA research workflows, and a raw material for kit and reagent manufacturers that build RNA ligation steps into their own products.

Product Features

  • Joins single-stranded RNA, DNA, and mononucleotides: The enzyme ligates the 5′-phosphate and 3′-hydroxyl termini of ssRNA, ssDNA, or mononucleotides, so it works on RNA-RNA and RNA-DNA joins, as well as on single nucleotides.
  • Intermolecular and intramolecular ligation: It supports both joining of separate molecules and ligation within one molecule, which gives flexibility across different experimental designs.
  • Broad application coverage: Applications include joining of ssRNA, joining of ssRNA to ssDNA, ³²P 3′-end labeling of RNA with 5′-[³²P]pCp, synthesis of oligo RNAs and DNAs, tRNA modification, and introduction of non-natural amino acids into proteins.

FAQ

Q1: What substrates does T4 RNA Ligase 1 act on, and what does it need to work?

It acts on single-stranded RNA, single-stranded DNA, or mononucleotides. The reaction is ATP-dependent and forms a phosphodiester bond between a 5′-phosphate terminus (the donor) and a 3′-hydroxyl terminus (the acceptor). Substrates therefore need a 5′-phosphate on one end and a free 3′-OH on the other end to be joined.

Q2: How is T4 RNA Ligase 1 different from T4 RNA Ligase 2?

T4 RNA Ligase 1 acts on single-stranded ends, so it is used for ssRNA joining, ssRNA-to-ssDNA joining, and 3′-end labeling. T4 RNA Ligase 2 is a double-stranded RNA ligase that prefers nicks within double-stranded RNA over the ends of single-stranded RNA. The choice depends on whether your substrate is single-stranded with free ends or a nicked duplex.

Q3: What applications is the enzyme used for?

Typical applications are intermolecular joining of ssRNA, joining of ssRNA to ssDNA, labeling of ssRNA 3′-OH ends with 5′-[³²P]pCp, synthesis of single-stranded oligo RNAs and oligo DNAs, special modification of tRNAs, and introduction of non-natural amino acids into proteins.